FBIP: Establishment of a fully data-based and barcoded collection of mushroom pathogens for South Africa

出現紀錄
最新版本 published by South African National Biodiversity Institute on 9月 30, 2020 South African National Biodiversity Institute
發布日期:
2020年9月30日
授權條款:
CC-BY 4.0

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說明

The establishment of a database for mushroom pathogens, including establishing a DNA reference library for quick identification.

資料紀錄

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版本

以下的表格只顯示可公開存取資源的已發布版本。

如何引用

研究者應依照以下指示引用此資源。:

van der Linde E (2020): FBIP: Establishment of a fully data-based and barcoded collection of mushroom pathogens for South Africa. v1.0. South African National Biodiversity Institute. Dataset/Occurrence. http://ipt.sanbi.org.za/iptsanbi/resource?r=fbip1&v=1.0

權利

研究者應尊重以下權利聲明。:

此資料的發布者及權利單位為 South African National Biodiversity Institute。 This work is licensed under a Creative Commons Attribution (CC-BY 4.0) License.

GBIF 註冊

此資源已向GBIF註冊,並指定以下之GBIF UUID: c566874c-6163-4098-8778-778fee6fa41f。  South African National Biodiversity Institute 發佈此資源,並經由South African Biodiversity Information Facility同意向GBIF註冊成為資料發佈者。

關鍵字

Occurrence; Specimen

聯絡資訊

Elna van der Linde
  • 元數據提供者
  • 出處
  • 連絡人
Manager: Mycology Unit, Biosystematics Programme
Agricultural Research Council, PPRI
Private Bag X134
0121 Queenswood
Gauteng
ZA
+27128088288
Mahlatse Kgatla
  • 散布者
FBIP Data Specialist
SANBI
2 Cussonia Avenue, Brummeria
0184 Pretoria
Gauteng
ZA
0128435196

地理涵蓋範圍

Global (Australia, Belgium, Canada, Denmark, France, Germany, Ireland, Ireland, Netherlands, New Zealand, Poland, RSA, The Netherlands, UK, USA)

界定座標範圍 緯度南界 經度西界 [-90, -180], 緯度北界 經度東界 [90, 180]

分類群涵蓋範圍

Identification of mushroom pathogens

Kingdom Fungi

時間涵蓋範圍

起始日期 / 結束日期 1929-01-01 / 2011-10-01

計畫資料

The establishment of a database for mushroom pathogens, including establishing a DNA reference library for quick identification.

計畫名稱 FBIP: Establishment of a fully data-based and barcoded collection of mushroom pathogens for South Africa
辨識碼 IBSG13052418260
經費來源 Foundational Biodiversity Information Programme
研究區域描述 Global (Australia, Belgium, Canada, Denmark, France, Germany, Ireland, Ireland, Netherlands, New Zealand, Poland, RSA, The Netherlands, UK, USA)

參與計畫的人員:

Elna van der Linde
  • 研究主持人

取樣方法

A comparison between the databases of the UP mushroom research group and PPRI concerning mushroom pathogens was done to identify any isolates that were not yet contained in both collections; these were revived and exchanged. Missing collection data were added as far as possible. The UP database was upgraded by an MSc student who also coordinated plating of cultures for barcoding and addition to the PPRI collection. Each isolate will have data fields containing the following information: o Numbers: PPRI number, UP collection number, any other collection/reference numbers (e.g. in case of foreign specimens) o Identity: genus, species, authors, synonyms o Higher classification: family, order, class etc. o Dates: dates collected, isolated, preserved, deposited o Host / substrate information: host type (= fungus), scientific and common name o Locality details: country, province, town, farm o Collector name, identified by, verified by o Barcoded: Y / N, and barcode reference no. referring to sequence file – to be added For barcoding, the mushroom pathogens (per genus) of the UP collection were plated and checked for viability and purity. This involved plating on required growth media, incubation, checking viability and purity and preservation of voucher cultures under water, under oil, ultra-low freezing as well as freeze drying. The SA isolates were done first, followed by the foreign ones.

研究範圍 Global (Australia, Belgium, Canada, Denmark, France, Germany, Ireland, Ireland, Netherlands, New Zealand, Poland, RSA, The Netherlands, UK, USA)
品質控管 None

方法步驟描述:

  1. NA

額外的詮釋資料